Solyc06g076340.3.1 (Solyc06g076340.3)


Aliases : Solyc06g076340.3

Description : No description available


Gene families : OG_01_0000579 (Gene family) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g076340.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G10360 APUM4, PUM4 pumilio 4 0.04 Gene family
Cpa|evm.model.tig00001065.14 No alias No description available 0.01 Gene family
GSVIVT01016236001 No alias No description available 0.05 Gene family
GSVIVT01016507001 No alias No description available 0.07 Gene family
LOC_Os02g57390 Os02g0819300 No description available 0.03 Gene family
MA_10434828g0010 No alias 35.1.12 not assigned.no ontology.pumilio/Puf RNA-binding... 0.03 Gene family
MA_23070g0010 No alias No description available 0.02 Gene family
Smo1983 PACid_15411026 No description available 0.02 Gene family
Smo86145 PACid_15420610 No description available 0.02 Gene family
Zm00001d018496 No alias No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 731 760
IPR001313 Pumilio_RNA-bd_rpt 876 908
IPR001313 Pumilio_RNA-bd_rpt 803 830
IPR001313 Pumilio_RNA-bd_rpt 694 724
IPR001313 Pumilio_RNA-bd_rpt 769 799
IPR001313 Pumilio_RNA-bd_rpt 925 951
IPR001313 Pumilio_RNA-bd_rpt 840 870
IPR001313 Pumilio_RNA-bd_rpt 659 691
IPR012940 NABP 286 337
IPR012940 NABP 337 657
No external refs found!