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  5. Ceric.04G087900.1

Ceric.04G087900.1 (RVE2, CIR1, Ceric.04G087900)


Aliases : RVE2, CIR1, Ceric.04G087900

Description : transcription factor *(REVEILLE) & original description: pacid=50631299 polypeptide=Ceric.04G087900.1.p locus=Ceric.04G087900 ID=Ceric.04G087900.1.v2.1 annot-version=v2.1


Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.04G087900.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272270 LHY1, LHY,... Multi-process regulation.circadian clock.core oscillator... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00072910 RVE2, CIR1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G01060 LHY1, LHY Homeodomain-like superfamily protein 0.12 OrthoFinder output from all 47 species
AT1G01520 No alias Homeodomain-like superfamily protein 0.09 OrthoFinder output from all 47 species
AT2G46830 CCA1 circadian clock associated 1 0.11 OrthoFinder output from all 47 species
AT3G09600 No alias Homeodomain-like superfamily protein 0.12 OrthoFinder output from all 47 species
AT5G17300 RVE1 Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g05996 No alias circadian clock factor *(REVEILLE) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12530 RVE2, CIR1 circadian clock core oscillator protein *(LHY/CCA1) &... 0.03 OrthoFinder output from all 47 species
Als_g15171 RVE1 circadian clock core oscillator protein *(LHY/CCA1) &... 0.06 OrthoFinder output from all 47 species
Aob_g01863 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05829 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13615 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20881 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene01893.t1 Aspi01Gene01893 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31403.t1 RVE1, Aspi01Gene31403 transcription factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0001.g000277 No alias circadian clock factor *(REVEILLE) & original... 0.1 OrthoFinder output from all 47 species
Azfi_s0005.g008971 RVE1 transcription factor *(REVEILLE) & original description:... 0.1 OrthoFinder output from all 47 species
Azfi_s0042.g026930 CCA1 circadian clock core oscillator protein *(LHY/CCA1) &... 0.1 OrthoFinder output from all 47 species
Cba_g24529 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Cre12.g514400 RVE2, CIR1 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dac_g06441 No alias transcription factor *(REVEILLE) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g11557 No alias circadian clock factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22032 RVE1 transcription factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g03179 RVE2, CIR1 circadian clock core oscillator protein *(LHY/CCA1) &... 0.03 OrthoFinder output from all 47 species
Dde_g23475 RVE1 circadian clock core oscillator protein *(LHY/CCA1) &... 0.05 OrthoFinder output from all 47 species
Ehy_g09144 RVE1 transcription factor *(REVEILLE) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01025544001 No alias Multi-process regulation.circadian clock.evening element... 0.05 OrthoFinder output from all 47 species
GSVIVT01027456001 CCA1 Multi-process regulation.circadian clock.core oscillator... 0.11 OrthoFinder output from all 47 species
LOC_Os02g45670.1 LOC_Os02g45670 transcription factor (MYB-related). REVEILLE circadian... 0.11 OrthoFinder output from all 47 species
LOC_Os06g01670.1 LOC_Os06g01670 transcription factor (MYB-related). REVEILLE circadian... 0.03 OrthoFinder output from all 47 species
LOC_Os06g51260.1 RVE2, CIR1,... transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
LOC_Os08g06110.3 LHY1, LHY, LOC_Os08g06110 transcription factor (MYB-related). circadian clock core... 0.06 OrthoFinder output from all 47 species
Len_g19700 RVE1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11537 RVE1 transcription factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species
MA_11267g0020 RVE1 transcription factor (MYB-related). circadian clock core... 0.03 OrthoFinder output from all 47 species
Mp2g14310.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.03 OrthoFinder output from all 47 species
Msp_g26311 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g16347 RVE2, CIR1 transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51660 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Smo166821 No alias Multi-process regulation.circadian clock.core oscillator... 0.09 OrthoFinder output from all 47 species
Solyc02g036370.3.1 RVE1, Solyc02g036370 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Solyc03g098320.4.1 RVE1, Solyc03g098320 transcription factor (MYB-related) 0.08 OrthoFinder output from all 47 species
Solyc10g005080.3.1 LHY1, LHY, Solyc10g005080 transcription factor (MYB-related). circadian clock core... 0.04 OrthoFinder output from all 47 species
Solyc10g084370.3.1 Solyc10g084370 transcription factor (MYB-related). REVEILLE circadian... 0.08 OrthoFinder output from all 47 species
Zm00001e013333_P002 RVE2, CIR1,... transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e021724_P005 LHY1, LHY, Zm00001e021724 transcription factor (MYB-related). circadian clock core... 0.06 OrthoFinder output from all 47 species
Zm00001e023232_P002 Zm00001e023232 transcription factor (MYB-related). REVEILLE circadian... 0.02 OrthoFinder output from all 47 species
Zm00001e040217_P001 LHY1, LHY, Zm00001e040217 circadian clock core oscillator protein (LHY|CCA1) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0004325 ferrochelatase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006783 heme biosynthetic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 65 108
No external refs found!