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  5. Ceric.04G042500.1

Ceric.04G042500.1 (Ceric.04G042500)


Aliases : Ceric.04G042500

Description : not classified & original description: pacid=50630591 polypeptide=Ceric.04G042500.1.p locus=Ceric.04G042500 ID=Ceric.04G042500.1.v2.1 annot-version=v2.1


Gene families : OG0006850 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.04G042500.1

Target Alias Description ECC score Gene Family Method Actions
AT2G28605 No alias Photosystem II reaction center PsbP family protein 0.06 OrthoFinder output from all 47 species
Aob_g11427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g65663 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000900.25 No alias No description available 0.03 OrthoFinder output from all 47 species
Cre16.g678851 No alias PsbP domain-containing protein 2, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g37232 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26628 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01022331001 No alias PsbP domain-containing protein 2, chloroplastic... 0.04 OrthoFinder output from all 47 species
MA_8140147g0010 No alias PsbP domain-containing protein 2, chloroplastic... 0.06 OrthoFinder output from all 47 species
Mp5g12900.1 No alias PsbP domain-containing protein 2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Nbi_g10160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35950 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021226 No alias not classified & original description: CDS=1234-2040 0.07 OrthoFinder output from all 47 species
Solyc04g009420.3.1 Solyc04g009420 PsbP domain-containing protein 2, chloroplastic... 0.09 OrthoFinder output from all 47 species
Spa_g11797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e040897_P001 Zm00001e040897 PsbP domain-containing protein 2, chloroplastic... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002683 PsbP_C 122 274
No external refs found!