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Aliases : Ceric.04G040100
Description : not classified & original description: pacid=50631977 polypeptide=Ceric.04G040100.1.p locus=Ceric.04G040100 ID=Ceric.04G040100.1.v2.1 annot-version=v2.1
Gene families : OG0014971 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0014971_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.04G040100.1 | |
| Cluster | HCCA: Cluster_142 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Dde_g48893 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0031267 | small GTPase binding | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 150 | 172 |
| IPR002885 | Pentatricopeptide_repeat | 557 | 582 |
| IPR002885 | Pentatricopeptide_repeat | 456 | 478 |
| IPR002885 | Pentatricopeptide_repeat | 353 | 377 |
| IPR002885 | Pentatricopeptide_repeat | 76 | 100 |
| IPR002885 | Pentatricopeptide_repeat | 658 | 681 |
| IPR002885 | Pentatricopeptide_repeat | 482 | 522 |
| IPR002885 | Pentatricopeptide_repeat | 175 | 224 |
| IPR002885 | Pentatricopeptide_repeat | 583 | 630 |
| IPR002885 | Pentatricopeptide_repeat | 380 | 428 |
| No external refs found! |