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  5. Ceric.04G012100.1

Ceric.04G012100.1 (Ceric.04G012100)


Aliases : Ceric.04G012100

Description : not classified & original description: pacid=50630823 polypeptide=Ceric.04G012100.1.p locus=Ceric.04G012100 ID=Ceric.04G012100.1.v2.1 annot-version=v2.1


Gene families : OG0000954 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000954_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.04G012100.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00129820 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G27650 No alias Tudor/PWWP/MBT superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g42825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32171 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g38053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10197194g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8546g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Pir_g06983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g099360.3.1 Solyc01g099360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 1546 1593
IPR000313 PWWP_dom 70 148
No external refs found!