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  5. Ceric.03G102500.1

Ceric.03G102500.1 (Ceric.03G102500)


Aliases : Ceric.03G102500

Description : bHLH-type transcription factor & original description: pacid=50571755 polypeptide=Ceric.03G102500.1.p locus=Ceric.03G102500 ID=Ceric.03G102500.1.v2.1 annot-version=v2.1


Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.03G102500.1

Target Alias Description ECC score Gene Family Method Actions
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g03958 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27615 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04159 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g32827 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003701001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01004409001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01036959001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
LOC_Os03g12760.1 LOC_Os03g12760 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
LOC_Os03g46860.1 LOC_Os03g46860 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species
LOC_Os12g43620.1 LOC_Os12g43620 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Lfl_g30933 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_94246g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g25200.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.01 OrthoFinder output from all 47 species
Msp_g03516 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48784 NAI1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37020 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g12007 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31815 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g35905 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g106460.4.1 Solyc01g106460 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Solyc05g009640.4.1 Solyc05g009640 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e003314_P001 Zm00001e003314 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Zm00001e005533_P001 Zm00001e005533 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 233 278
No external refs found!