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Aliases : RAB1C, ATRAB1C, ATRABD2C, Ceric.03G089700
Description : D-class RAB GTPase & original description: pacid=50572227 polypeptide=Ceric.03G089700.1.p locus=Ceric.03G089700 ID=Ceric.03G089700.1.v2.1 annot-version=v2.1
Gene families : OG0001129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.03G089700.1 | |
| Cluster | HCCA: Cluster_66 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G17530 | RAB1C, ATRAB1C, ATRABD2C | RAB GTPase homolog 1C | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g105164 | RAB1C, ATRAB1C, ATRABD2C | D-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g42380 | RAB1C, ATRAB1C, ATRABD2C | D-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04170 | RAB1C, ATRAB1C, ATRABD2C | D-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09984 | ATRAB1B, RABD2A,... | D-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cre12.g560150 | ATRAB1A, ATRABD2B, RAB1A | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g35830 | ATRAB1A, ATRABD2B, RAB1A | D-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06900 | ATRAB1B, RABD2A,... | D-class RAB GTPase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g22787 | ATRAB1A, ATRABD2B, RAB1A | D-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29131 | RAB1C, ATRAB1C, ATRABD2C | D-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_158684g0010 | ATRAB1B, RABD2A,... | Ras-related protein RABD2a OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Mp3g00710.1 | ATRAB1A, ATRABD2B, RAB1A | D-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g17943 | RAB1C, ATRAB1C, ATRABD2C | D-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0056.g014533 | RAB1C, ATRAB1C, ATRABD2C | not classified & original description: CDS=274-789 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19661 | No alias | D-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEA | Interproscan |
| MF | GO:0005525 | GTP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001806 | Small_GTPase | 10 | 170 |
| No external refs found! |