- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : Ceric.03G070800
Description : component *(Snu13) of snoRNP rRNA methylation complex & original description: pacid=50573317 polypeptide=Ceric.03G070800.1.p locus=Ceric.03G070800 ID=Ceric.03G070800.1.v2.1 annot-version=v2.1
Gene families : OG0002183 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002183_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00103630 | evm_27.TU.AmTr_v1... | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00043p00189790 | evm_27.TU.AmTr_v1... | RNA processing.RNA modification.rRNA/tRNA... | 0.03 | OrthoFinder output from all 47 species | |
| AT4G12600 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.07 | OrthoFinder output from all 47 species | |
| AT5G20160 | No alias | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.08 | OrthoFinder output from all 47 species | |
| Aop_g04016 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene59957.t1 | Aspi01Gene59957 | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0280.g062289 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000600.11 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g249250 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.08 | OrthoFinder output from all 47 species | |
| Dac_g02506 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g29609 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01015520001 | No alias | RNA processing.RNA modification.rRNA/tRNA... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_01849 | No alias | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.07 | OrthoFinder output from all 47 species | |
| LOC_Os03g13800.1 | LOC_Os03g13800 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os10g03540.1 | LOC_Os10g03540 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54239 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.04 | OrthoFinder output from all 47 species | |
| MA_16906g0010 | No alias | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.11 | OrthoFinder output from all 47 species | |
| MA_433779g0010 | No alias | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c14_21860V3.1 | Pp3c14_21860 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c17_18010V3.1 | Pp3c17_18010 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g08742 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Sam_g08743 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g56417 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g30682 | No alias | component *(Snu13) of snoRNP rRNA methylation complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e001004_P001 | Zm00001e001004 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e038611_P002 | Zm00001e038611 | protein factor NHP2L1/SNU13 of U4/U6 small nuclear... | 0.08 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005839 | proteasome core complex | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004038 | Ribosomal_L7Ae/L30e/S12e/Gad45 | 25 | 111 |
| No external refs found! |