Ceric.03G064000.1 (Ceric.03G064000)

Aliases : Ceric.03G064000

Description : exoribonuclease *(RRP6L) & original description: pacid=50572113 polypeptide=Ceric.03G064000.1.p locus=Ceric.03G064000 ID=Ceric.03G064000.1.v2.1 annot-version=v2.1

Gene families : OG0002027 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002027_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.03G064000.1
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
Adi_g023610	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g01185	No alias	exoribonuclease *(RRP6L) & original description: none	0.06	OrthoFinder output from all 47 species
Cba_g02095	No alias	exoribonuclease *(RRP6L) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g36294	No alias	exoribonuclease *(RRP6L) & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g16474	No alias	exoribonuclease *(RRP6L) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01029953001	No alias	RNA processing.RNA decay.exosome complex.associated...	0.03	OrthoFinder output from all 47 species
Gb_34925	No alias	exoribonuclease (RRP6L)	0.03	OrthoFinder output from all 47 species
LOC_Os10g30100.1	LOC_Os10g30100	exoribonuclease (RRP6L)	0.03	OrthoFinder output from all 47 species
Lfl_g02289	No alias	exoribonuclease *(RRP6L) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g37433	No alias	exoribonuclease *(RRP6L) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g20342	No alias	exoribonuclease *(RRP6L) & original description: none	0.03	OrthoFinder output from all 47 species
Solyc10g018520.1.1	Solyc10g018520	exoribonuclease (RRP6L)	0.04	OrthoFinder output from all 47 species
Spa_g12919	No alias	exoribonuclease *(RRP6L) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e004727_P001	Zm00001e004727	exoribonuclease (RRP6L)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005667	transcription regulator complex	IEP	HCCA
CC	GO:0005669	transcription factor TFIID complex	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
MF	GO:0018024	histone lysine N-methyltransferase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
MF	GO:0042054	histone methyltransferase activity	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002562	3'-5'_exonuclease_dom	1	35
IPR002121	HRDC_dom	87	154

External Links

No external refs found!

Ceric.03G064000.1 (Ceric.03G064000)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation