1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.03G062100.1

Ceric.03G062100.1 (ASK2, SKP1B, Ceric.03G062100)


Aliases : ASK2, SKP1B, Ceric.03G062100

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes & original description: pacid=50571974 polypeptide=Ceric.03G062100.1.p locus=Ceric.03G062100 ID=Ceric.03G062100.1.v2.1 annot-version=v2.1


Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.03G062100.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00153350 ASK1, ATSKP1,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Adi_g000276 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g011878 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g042162 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g100138 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aop_g03068 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.06 OrthoFinder output from all 47 species
Aop_g66890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0007.g010602 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g30378 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cre12.g501200 ASK2, SKP1B Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01009967001 ASK2, SKP1B Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Mp3g00120.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.02 OrthoFinder output from all 47 species
Pnu_g03646 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0006848 pyruvate transport IEP HCCA
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:1901475 pyruvate transmembrane transport IEP HCCA
BP GO:1903825 organic acid transmembrane transport IEP HCCA
BP GO:1905039 carboxylic acid transmembrane transport IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 5 63
IPR016072 Skp1_comp_dimer 110 157
No external refs found!