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  5. Ceric.03G030600.1

Ceric.03G030600.1 (Ceric.03G030600)


Aliases : Ceric.03G030600

Description : component *(PRL1/MAC2) of MAC spliceosome-associated complex & original description: pacid=50572589 polypeptide=Ceric.03G030600.1.p locus=Ceric.03G030600 ID=Ceric.03G030600.1.v2.1 annot-version=v2.1


Gene families : OG0005707 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005707_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.03G030600.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g078395 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Aob_g28647 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Aop_g11176 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000880.13 No alias RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Cre10.g446900 No alias RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Dcu_g02902 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.05 OrthoFinder output from all 47 species
GSVIVT01035143001 PRL1 RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
LOC_Os03g21990.1 PRL1, LOC_Os03g21990 component PRL1/MAC2 of non-snRNP MOS4-associated complex 0.07 OrthoFinder output from all 47 species
Mp6g09620.1 No alias component PRL1/MAC2 of non-snRNP MOS4-associated complex 0.08 OrthoFinder output from all 47 species
Ppi_g02082 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.04 OrthoFinder output from all 47 species
Sam_g07774 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.05 OrthoFinder output from all 47 species
Spa_g05137 No alias component *(PRL1/MAC2) of MAC spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Zm00001e005096_P001 PRL1, Zm00001e005096 component PRL1/MAC2 of non-snRNP MOS4-associated complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 206 244
IPR001680 WD40_repeat 165 202
IPR001680 WD40_repeat 249 286
IPR001680 WD40_repeat 292 328
IPR001680 WD40_repeat 387 411
No external refs found!