Description : not classified & original description: none
Gene families : OG0002837 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002837_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aev_g48839 | |
Cluster | HCCA: Cluster_123 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00140p00029580 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.PHD finger... | 0.04 | OrthoFinder output from all 47 species | |
AT2G27980 | No alias | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.36G048800.1 | Ceric.36G048800 | not classified & original description: pacid=50568689... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.36G053700.1 | Ceric.36G053700 | not classified & original description: pacid=50569216... | 0.04 | OrthoFinder output from all 47 species | |
Cre01.g018200 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g12142 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01033711001 | No alias | RNA biosynthesis.transcriptional activation.PHD finger... | 0.02 | OrthoFinder output from all 47 species | |
Mp2g04330.1 | No alias | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
Pir_g47833 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g28171 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g36826 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g083800.2.1 | Solyc10g083800 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Solyc10g084650.3.1 | Solyc10g084650 | PHD finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g066480.2.1 | Solyc11g066480 | PHD finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e029784_P001 | Zm00001e029784 | PHD finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
BP | GO:0006476 | protein deacetylation | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016575 | histone deacetylation | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
CC | GO:0032039 | integrator complex | IEP | HCCA |
BP | GO:0035601 | protein deacylation | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
BP | GO:0098732 | macromolecule deacylation | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No external refs found! |