Solyc06g073880.3.1 (Solyc06g073880.3)


Aliases : Solyc06g073880.3

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. Double mutant analyses with RHF1a suggests that RHF2a may be involved in targetting ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF2a is expressed in all four floral whorls and is present at ~8-fold higher levels than RHF1a in inflorescences by RT-PCR analyses. RING-H2 group F2A (RHF2A)


Gene families : OG_01_0002495 (Gene family) Phylogenetic Tree(s): OG0002495_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g073880.3.1
Cluster HCCA cluster: Cluster_300

Target Alias Description ECC score Gene Family Method Actions
AT4G14220 RHF1A RING-H2 group F1A 0.03 Gene family
AT5G22000 RHF2A RING-H2 group F2A 0.04 Gene family
GSVIVT01037523001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
LOC_Os03g57500 Os03g0788800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os11g36430 Os11g0572500 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_10432852g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Smo89697 PACid_15411086 No description available 0.01 Gene family
Zm00001d013107 GRMZM2G027495 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d052930 GRMZM2G119930 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 29 70
No external refs found!