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  5. Ceric.02G105600.1

Ceric.02G105600.1 (Ceric.02G105600)


Aliases : Ceric.02G105600

Description : FSD2-interacting component of plastid-encoded RNA polymerase & original description: pacid=50585278 polypeptide=Ceric.02G105600.1.p locus=Ceric.02G105600 ID=Ceric.02G105600.1.v2.1 annot-version=v2.1


Gene families : OG0005190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.02G105600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00062400 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species
AT5G48470 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Ala_g06367 No alias FSD2-interacting component of plastid-encoded RNA... 0.05 OrthoFinder output from all 47 species
Cba_g08833 No alias FSD2-interacting component of plastid-encoded RNA... 0.02 OrthoFinder output from all 47 species
Dcu_g12851 No alias FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Ehy_g03442 No alias FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01006226001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
LOC_Os11g23790.1 LOC_Os11g23790 FSD2-interacting component of plastid-encoded RNA polymerase 0.02 OrthoFinder output from all 47 species
Mp4g06930.1 No alias FSD2-interacting component of plastid-encoded RNA polymerase 0.06 OrthoFinder output from all 47 species
Ore_g03758 No alias FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Pp3c19_21450V3.1 Pp3c19_21450 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g61654 No alias FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007564 No alias FSD2-interacting component of plastid-encoded RNA... 0.04 OrthoFinder output from all 47 species
Sam_g15326 No alias FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Smo74502 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
Spa_g53932 No alias FSD2-interacting component of plastid-encoded RNA... 0.03 OrthoFinder output from all 47 species
Zm00001e021412_P001 Zm00001e021412 FSD2-interacting component of plastid-encoded RNA polymerase 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003852 2-isopropylmalate synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006551 leucine metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0009098 leucine biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!