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  5. Ceric.02G101000.1

Ceric.02G101000.1 (AFB2, Ceric.02G101000)


Aliases : AFB2, Ceric.02G101000

Description : substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) & original description: pacid=50585915 polypeptide=Ceric.02G101000.1.p locus=Ceric.02G101000 ID=Ceric.02G101000.1.v2.1 annot-version=v2.1


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.02G101000.1

Target Alias Description ECC score Gene Family Method Actions
AT5G49980 AFB5 auxin F-box protein 5 0.05 OrthoFinder output from all 47 species
Adi_g014124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g32460.1 AFB2, LOC_Os04g32460 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Zm00001e008324_P001 AFB2, Zm00001e008324 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Zm00001e015908_P001 Zm00001e015908 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
Zm00001e023831_P001 Zm00001e023831 component TIR1/AFB of auxin receptor complex. component... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR041101 Transp_inhibit 135 181
IPR041567 COI1_F-box 77 115
IPR001611 Leu-rich_rpt 549 568
IPR001611 Leu-rich_rpt 223 241
No external refs found!