Solyc06g073530.2.1 (Solyc06g073530.2)


Aliases : Solyc06g073530.2

Description : 27.3.36 RNA.regulation of transcription.Argonaute AGO4 is a member of a class of PAZ/PIWI domain containing proteins involved in siRNA mediated gene silencing.Loss of function mutations have reduced site specific CpNpG and CpHpH methylation and increased susceptibility to bacterial pathogens. ARGONAUTE 4 (AGO4)


Gene families : OG_01_0000084 (Gene family) Phylogenetic Tree(s): OG0000084_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g073530.2.1

Target Alias Description ECC score Gene Family Method Actions
AT2G27040 AGO4, OCP11 Argonaute family protein 0.02 Gene family
Cre02.g141050 No alias 33.99 development.unspecified ARGONAUTE 5 (AGO5) 0.01 Gene family
GSVIVT01015464001 No alias 29.2.3 protein.synthesis.initiation Encodes a member of... 0.04 Gene family
LOC_Os03g47830 Os03g0682600 33.99 development.unspecified Encodes an RNA Slicer that... 0.01 Gene family
MA_594g0010 No alias 33.99 development.unspecified Encodes an RNA Slicer that... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003100 PAZ_dom 296 426
IPR032474 Argonaute_N 74 230
IPR032472 ArgoL2 436 481
IPR014811 ArgoL1 242 291
IPR003165 Piwi 580 886
No external refs found!