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  5. Ceric.02G074700.1

Ceric.02G074700.1 (NTMC2T1.2, SYTB,...)


Aliases : NTMC2T1.2, SYTB, SYT2, NTMC2TYPE1.2, ATSYTB, Ceric.02G074700

Description : membrane tethering protein (SYT1) of ER-cytoskeleton-plasmamembrane interface & original description: pacid=50586163 polypeptide=Ceric.02G074700.1.p locus=Ceric.02G074700 ID=Ceric.02G074700.1.v2.1 annot-version=v2.1


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.02G074700.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT5G11100 NTMC2TYPE2.2,... Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Adi_g089664 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g17950.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g32127 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09774 SYT5, NTMC2T2.1,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g15399 No alias membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Solyc05g047710.3.1 NTMC2TYPE4,... Synaptotagmin-4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 261 357
IPR000008 C2_dom 415 516
IPR039010 Synaptotagmin_SMP 67 241
No external refs found!