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  5. Ceric.02G046700.1

Ceric.02G046700.1 (Ceric.02G046700)


Aliases : Ceric.02G046700

Description : component *(CHL-L) of light-independent protochlorophyllide oxidoreductase complex & original description: pacid=50584654 polypeptide=Ceric.02G046700.1.p locus=Ceric.02G046700 ID=Ceric.02G046700.1.v2.1 annot-version=v2.1


Gene families : OG0009362 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009362_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.02G046700.1
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
Aev_g09367 No alias component *(CHL-L) of light-independent... 0.04 OrthoFinder output from all 47 species
Cba_g61905 No alias component *(CHL-L) of light-independent... 0.04 OrthoFinder output from all 47 species
Ceric.04G025000.1 Ceric.04G025000 component *(CHL-L) of light-independent... 0.06 OrthoFinder output from all 47 species
Ceric.05G047600.1 Ceric.05G047600 component *(CHL-L) of light-independent... 0.1 OrthoFinder output from all 47 species
Ceric.09G049500.1 Ceric.09G049500 component *(CHL-L) of light-independent... 0.06 OrthoFinder output from all 47 species
Ceric.18G054500.1 Ceric.18G054500 component *(CHL-L) of light-independent... 0.04 OrthoFinder output from all 47 species
Ceric.32G035700.1 ACCD, Ceric.32G035700 component *(CHL-L) of light-independent... 0.12 OrthoFinder output from all 47 species
Lfl_g19196 No alias component *(CHL-L) of light-independent... 0.06 OrthoFinder output from all 47 species
Nbi_g21916 No alias component *(CHL-L) of light-independent... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0140.g022701 No alias not classified & original description: CDS=1-276 0.03 OrthoFinder output from all 47 species
Tin_g15306 No alias component *(CHL-L) of light-independent... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000392 NifH/frxC 1 244
No external refs found!