Ceric.02G042800.1 (ATPUB45, PUB45,...)

Aliases : ATPUB45, PUB45, Ceric.02G042800

Description : U-Box-group-II E3 ubiquitin ligase & original description: pacid=50585031 polypeptide=Ceric.02G042800.1.p locus=Ceric.02G042800 ID=Ceric.02G042800.1.v2.1 annot-version=v2.1

Gene families : OG0004266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004266_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.02G042800.1
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00240140	evm_27.TU.AmTr_v1...	U-box domain-containing protein 4 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
AT3G47820	PUB39	PLANT U-BOX 39	0.08	OrthoFinder output from all 47 species
Aop_g04662	PUB38, ATPUB38	U-Box-group-II E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0003.g007764	PUB39	U-Box-group-II E3 ubiquitin ligase & original...	0.03	OrthoFinder output from all 47 species
Ceric.29G047200.1	PUB39, Ceric.29G047200	U-Box-group-II E3 ubiquitin ligase & original...	0.06	OrthoFinder output from all 47 species
Dcu_g40033	PUB38, ATPUB38	U-Box-group-II E3 ubiquitin ligase & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g03795	PUB39	U-Box-group-II E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g16204	PUB39	U-Box-group-II E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_13006	PUB38, ATPUB38	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Gb_16859	PUB38, ATPUB38	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
LOC_Os09g21740.1	PUB38, ATPUB38,...	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
Lfl_g02186	PUB38, ATPUB38	U-Box-group-II E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g25489	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g15300	No alias	U-Box-group-II E3 ubiquitin ligase & original description: none	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001736	PUB39	U-Box-group-II E3 ubiquitin ligase & original...	0.04	OrthoFinder output from all 47 species
Sam_g07889	No alias	U-Box-group-II E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Smo90666	PUB39	U-box domain-containing protein 38 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Spa_g26915	No alias	U-Box-group-II E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g22128	No alias	U-Box-group-II E3 ubiquiTin ligase & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
BP	GO:0006351	DNA-templated transcription	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0097659	nucleic acid-templated transcription	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	406	438
IPR000225	Armadillo	364	402
IPR003613	Ubox_domain	8	75

External Links

No external refs found!

Ceric.02G042800.1 (ATPUB45, PUB45,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation