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  5. Ceric.02G028400.1

Ceric.02G028400.1 (ATMSH4, MSH4, Ceric.02G028400)


Aliases : ATMSH4, MSH4, Ceric.02G028400

Description : component *(MSH4) of MSH4-MSH5 Holliday junction stabilizing heterodimer & original description: pacid=50585147 polypeptide=Ceric.02G028400.1.p locus=Ceric.02G028400 ID=Ceric.02G028400.1.v2.1 annot-version=v2.1


Gene families : OG0005572 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005572_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.02G028400.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01007407001 ATMSH4, MSH4 DNA mismatch repair protein MSH4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Mp1g18290.1 ATMSH4, MSH4 component MSH4 of MSH4-MSH5 Holliday junction... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006298 mismatch repair IEA Interproscan
MF GO:0030983 mismatched DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR000432 DNA_mismatch_repair_MutS_C 570 756
IPR007861 DNA_mismatch_repair_MutS_clamp 381 473
IPR007696 DNA_mismatch_repair_MutS_core 179 511
No external refs found!