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  5. Ceric.02G014900.1

Ceric.02G014900.1 (PSBE, Ceric.02G014900)


Aliases : PSBE, Ceric.02G014900

Description : component *(PsbL) of PS-II complex & original description: pacid=50583992 polypeptide=Ceric.02G014900.1.p locus=Ceric.02G014900 ID=Ceric.02G014900.1.v2.1 annot-version=v2.1


Gene families : OG0009554 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009554_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.02G014900.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00334p00011530 PSBE,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
ATCG00580 PSBE photosystem II reaction center protein E 0.16 OrthoFinder output from all 47 species
Azfi_s0026.g023366 No alias not classified & original description: CDS=1-432 0.06 OrthoFinder output from all 47 species
Ceric.05G050500.1 PSBE, Ceric.05G050500 component *(PsbL) of PS-II complex & original... 0.17 OrthoFinder output from all 47 species
Ceric.1Z018800.1 PSBE, Ceric.1Z018800 component alpha *(PsbE) of PS-II cytochrome b559... 0.11 OrthoFinder output from all 47 species
Ceric.30G064400.1 PSBE, Ceric.30G064400 component *(PsbL) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.38G007300.1 PSBE, Ceric.38G007300 component alpha *(PsbE) of PS-II cytochrome b559... 0.11 OrthoFinder output from all 47 species
LOC_Os06g39728.1 LOC_Os06g39728 component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.18 OrthoFinder output from all 47 species
LOC_Os08g15322.1 LOC_Os08g15322 component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.2 OrthoFinder output from all 47 species
LOC_Os10g21298.1 LOC_Os10g21298 component alpha/PsbE of PS-II cytochrome b559 heterodimer 0.2 OrthoFinder output from all 47 species
Smo137822 PSBE Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.09 OrthoFinder output from all 47 species
Solyc00g500021.1.1 PSBE, Solyc00g500021 component alpha/PsbE of PS-II cytochrome b559... 0.14 OrthoFinder output from all 47 species
Solyc00g500068.1.1 PSBE, Solyc00g500068 component alpha/PsbE of PS-II cytochrome b559... 0.14 OrthoFinder output from all 47 species
Solyc10g045230.1.1 PSBE, Solyc10g045230 component alpha/PsbE of PS-II cytochrome b559... 0.14 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009539 photosystem II reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009772 photosynthetic electron transport in photosystem II IEP HCCA
BP GO:0015977 carbon fixation IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0031647 regulation of protein stability IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0042301 phosphate ion binding IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050821 protein stabilization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013082 PSII_cytb559_asu_lum 42 80
IPR003372 PSII_PsbL 107 142
IPR013081 PSII_cyt_b559_N 82 97
IPR013081 PSII_cyt_b559_N 6 34
No external refs found!