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  5. Ceric.01G126500.1

Ceric.01G126500.1 (Ceric.01G126500)


Aliases : Ceric.01G126500

Description : splicing factor *(CFM9) & original description: pacid=50591393 polypeptide=Ceric.01G126500.1.p locus=Ceric.01G126500 ID=Ceric.01G126500.1.v2.1 annot-version=v2.1


Gene families : OG0001914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001914_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G126500.1

Target Alias Description ECC score Gene Family Method Actions
AT4G13070 No alias RNA-binding CRS1 / YhbY (CRM) domain protein 0.03 OrthoFinder output from all 47 species
Ala_g15290 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04012 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01780 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39701 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12917 No alias splicing factor *(CFM9) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01032387001 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
Gb_39033 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species
LOC_Os05g05300.1 LOC_Os05g05300 Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species
Len_g19656 No alias splicing factor *(CFM9) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427237g0020 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
MA_10436523g0010 No alias Uncharacterized CRM domain-containing protein At3g25440,... 0.04 OrthoFinder output from all 47 species
Pir_g19431 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66193 RAD23B, RAD23 ubiquitin-proteasome shuttle factor *(RAD23) & original... 0.03 OrthoFinder output from all 47 species
Sam_g08828 No alias splicing factor *(CFM9) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018569_P001 Zm00001e018569 Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species
Zm00001e027517_P001 Zm00001e027517 Uncharacterized CRM domain-containing protein At3g25440,... 0.02 OrthoFinder output from all 47 species
Zm00001e040411_P001 Zm00001e040411 Uncharacterized CRM domain-containing protein At3g25440,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 217 300
No external refs found!