Ceric.01G109800.1 (ABCG40, PDR12,...)

Aliases : ABCG40, PDR12, ATABCG40, ATPDR12, Ceric.01G109800

Description : subfamily ABCG transporter & original description: pacid=50591758 polypeptide=Ceric.01G109800.1.p locus=Ceric.01G109800 ID=Ceric.01G109800.1.v2.1 annot-version=v2.1

Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.01G109800.1
Cluster	HCCA: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00185210	PDR6, ATPDR6,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
AT4G15236	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.03	OrthoFinder output from all 47 species
Als_g47419	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Als_g49455	PDR6, ATPDR6	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene28063.t2	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene72851.t1	ABCG40, PDR12,...	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s2025.g108716	PEN3, ABCG36,...	not classified & original description: CDS=1-705	0.02	OrthoFinder output from all 47 species
Ceric.04G041200.1	PDR6, ATPDR6,...	subfamily ABCG transporter & original description:...	0.04	OrthoFinder output from all 47 species
GSVIVT01017196001	ABCG40, PDR12,...	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
GSVIVT01017200001	ABCG40, PDR12,...	Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum	0.02	OrthoFinder output from all 47 species
LOC_Os09g16449.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
MA_10427561g0020	ABCG40, PDR12,...	ABC transporter G family member 31 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_964768g0010	ABCG40, PDR12,...	ABC transporter G family member 39 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Nbi_g29622	PDR11, ATPDR11	subfamily ABCG transporter & original description: none	0.04	OrthoFinder output from all 47 species
Solyc05g053600.3.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Solyc08g067620.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.05	OrthoFinder output from all 47 species
Solyc12g019620.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.04	OrthoFinder output from all 47 species
Solyc12g019640.2.1	ABCG40, PDR12,...	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Zm00001e024257_P001	PDR11, ATPDR11,...	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0008171	O-methyltransferase activity	IEP	HCCA
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0072488	ammonium transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013581	PDR_assoc	223	271
IPR013525	ABC_2_trans	673	807
IPR013525	ABC_2_trans	7	201
IPR003439	ABC_transporter-like_ATP-bd	375	526

External Links

No external refs found!

Ceric.01G109800.1 (ABCG40, PDR12,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation