1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.01G107400.1

Ceric.01G107400.1 (ATX4, SDG16, Ceric.01G107400)


Aliases : ATX4, SDG16, Ceric.01G107400

Description : class-III histone methyltransferase *(Trx) & original description: pacid=50592619 polypeptide=Ceric.01G107400.1.p locus=Ceric.01G107400 ID=Ceric.01G107400.1.v2.1 annot-version=v2.1


Gene families : OG0000660 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000660_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G107400.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.11 OrthoFinder output from all 47 species
AT5G53430 SET29, SDG29, ATX5 SET domain group 29 0.04 OrthoFinder output from all 47 species
Ala_g07772 SDG25, ATXR7 EC_2.1 transferase transferring one-carbon group &... 0.07 OrthoFinder output from all 47 species
Ala_g11407 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Ala_g11532 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.09 OrthoFinder output from all 47 species
Als_g16658 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Als_g29274 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Als_g30869 ATX3, SDG14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32779 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Als_g56618 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Aob_g23333 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Aob_g29752 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.09 OrthoFinder output from all 47 species
Aspi01Gene46553.t2 ATX4, SDG16,... class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46554.t1 ATX4, SDG16,... class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46555.t1 SET29, SDG29,... N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.04 OrthoFinder output from all 47 species
Aspi01Gene52716.t1 SDG25, ATXR7,... class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene65361.t1 SDG25, ATXR7,... class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene66942.t1 SET29, SDG29,... N-methyltransferase component *(ATX3/4/5) of COMPASS... 0.05 OrthoFinder output from all 47 species
Azfi_s0271.g061215 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
Cre09.g395584 No alias No description available 0.04 OrthoFinder output from all 47 species
Cre11.g475950 SDG25, ATXR7 Histone-lysine N-methyltransferase ATXR7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g07171 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.1 OrthoFinder output from all 47 species
Dcu_g08323 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g09379 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.09 OrthoFinder output from all 47 species
Ehy_g07137 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01027118001 ATX4, SDG16 Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
GSVIVT01038708001 ATX4, SDG16 Chromatin organisation.histone modifications.histone... 0.05 OrthoFinder output from all 47 species
Gb_04139 SDG25, ATXR7 class III/Trithorax histone methyltransferase component... 0.05 OrthoFinder output from all 47 species
LOC_Os01g11952.1 SET29, SDG29,... class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
LOC_Os01g46700.1 ATX4, SDG16,... class III/Trithorax histone methyltransferase component... 0.13 OrthoFinder output from all 47 species
LOC_Os12g41900.1 SDG25, ATXR7,... class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
Len_g14720 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Len_g23260 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g09511 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.08 OrthoFinder output from all 47 species
Lfl_g10001 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.06 OrthoFinder output from all 47 species
Lfl_g17819 ATX4, SDG16 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Lfl_g38438 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.04 OrthoFinder output from all 47 species
MA_14080g0020 ATX3, SDG14 Histone-lysine N-methyltransferase ATX3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_18041g0010 SDG25, ATXR7 class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
Mp1g17790.1 SDG25, ATXR7 class III/Trithorax histone methyltransferase component... 0.06 OrthoFinder output from all 47 species
Mp4g21720.1 ATX4, SDG16 class III/Trithorax histone methyltransferase component... 0.03 OrthoFinder output from all 47 species
Msp_g13977 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Ore_g05016 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Ore_g13903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g34239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37084 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g09508 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001119 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.07 OrthoFinder output from all 47 species
Sam_g14051 No alias class-III histone methyltransferase *(Trx) & original... 0.09 OrthoFinder output from all 47 species
Sam_g14555 No alias class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Smo164635 ATX3, SDG14 Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Solyc01g006880.4.1 SDG25, ATXR7,... class III/Trithorax histone methyltransferase component... 0.05 OrthoFinder output from all 47 species
Solyc01g095890.4.1 ATX4, SDG16,... class III/Trithorax histone methyltransferase component... 0.02 OrthoFinder output from all 47 species
Solyc03g083410.3.1 ATX4, SDG16,... class III/Trithorax histone methyltransferase component... 0.1 OrthoFinder output from all 47 species
Spa_g09086 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.02 OrthoFinder output from all 47 species
Spa_g47178 SDG25, ATXR7 class-III histone methyltransferase *(Trx) & original... 0.03 OrthoFinder output from all 47 species
Spa_g55030 ATX3, SDG14 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Tin_g13372 SET29, SDG29, ATX5 class-III histone methyltransferase *(Trx) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e027986_P003 ATX4, SDG16,... class III/Trithorax histone methyltransferase component... 0.04 OrthoFinder output from all 47 species
Zm00001e039307_P005 SDG25, ATXR7,... class III/Trithorax histone methyltransferase component... 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 1391 1497
IPR000313 PWWP_dom 799 892
No external refs found!