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  5. Ceric.01G104900.1

Ceric.01G104900.1 (PSBK, Ceric.01G104900)


Aliases : PSBK, Ceric.01G104900

Description : component *(PsbK) of PS-II complex & original description: pacid=50591018 polypeptide=Ceric.01G104900.1.p locus=Ceric.01G104900 ID=Ceric.01G104900.1.v2.1 annot-version=v2.1


Gene families : OG0007203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G104900.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
ATCG00070 PSBK photosystem II reaction center protein K precursor 0.17 OrthoFinder output from all 47 species
Ceric.01G057000.1 PSBI, Ceric.01G057000 component *(PsbI) of PS-II reaction center complex &... 0.16 OrthoFinder output from all 47 species
Ceric.01G105000.1 PSBI, Ceric.01G105000 component *(PsbI) of PS-II reaction center complex &... 0.16 OrthoFinder output from all 47 species
Ceric.02G012100.1 PSBI, Ceric.02G012100 component *(PsbI) of PS-II reaction center complex &... 0.16 OrthoFinder output from all 47 species
Ceric.05G040800.1 PSBK, Ceric.05G040800 component *(PsbK) of PS-II complex & original... 0.05 OrthoFinder output from all 47 species
Ceric.13G052800.1 PSBI, Ceric.13G052800 component *(PsbI) of PS-II reaction center complex &... 0.16 OrthoFinder output from all 47 species
Ceric.13G052900.1 PSBK, Ceric.13G052900 component *(PsbK) of PS-II complex & original... 0.07 OrthoFinder output from all 47 species
Ceric.1Z023200.1 PSBI, Ceric.1Z023200 component *(PsbI) of PS-II reaction center complex &... 0.16 OrthoFinder output from all 47 species
Ceric.1Z023300.1 PSBK, Ceric.1Z023300 component *(PsbK) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z116900.1 PSBK, Ceric.1Z116900 component *(PsbK) of PS-II complex & original... 0.1 OrthoFinder output from all 47 species
Ceric.1Z117000.1 PSBI, Ceric.1Z117000 component *(PsbI) of PS-II reaction center complex &... 0.16 OrthoFinder output from all 47 species
Ceric.29G005500.1 PSBI, Ceric.29G005500 component *(PsbI) of PS-II reaction center complex &... 0.16 OrthoFinder output from all 47 species
GSVIVT01037458001 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 OrthoFinder output from all 47 species
LOC_Os02g24642.1 LOC_Os02g24642 component PsbK of PS-II complex 0.13 OrthoFinder output from all 47 species
LOC_Os04g16866.1 LOC_Os04g16866 component PsbK of PS-II complex 0.19 OrthoFinder output from all 47 species
LOC_Os10g41696.1 LOC_Os10g41696 component PsbK of PS-II complex 0.2 OrthoFinder output from all 47 species
Solyc00g500049.1.1 PSBK, Solyc00g500049 component PsbI of PS-II reaction center complex.... 0.15 OrthoFinder output from all 47 species
Solyc00g500132.1.1 PSBK, Solyc00g500132 component PsbI of PS-II reaction center complex.... 0.15 OrthoFinder output from all 47 species
Solyc00g500202.1.1 PSBK, Solyc00g500202 component PsbI of PS-II reaction center complex.... 0.15 OrthoFinder output from all 47 species
Solyc00g500293.1.1 PSBK, Solyc00g500293 component PsbI of PS-II reaction center complex.... 0.14 OrthoFinder output from all 47 species
Solyc00g500331.1.1 PSBK, Solyc00g500331 component PsbI of PS-II reaction center complex.... 0.15 OrthoFinder output from all 47 species
Zm00001e042045_P001 PSBK, Zm00001e042045 component PsbK of PS-II complex 0.05 OrthoFinder output from all 47 species
Zm00001e042111_P001 PSBK, Zm00001e042111 component PsbK of PS-II complex 0.05 OrthoFinder output from all 47 species
Zm00001e042159_P001 PSBK, Zm00001e042159 component PsbK of PS-II complex 0.05 OrthoFinder output from all 47 species
Zm00001e042175_P001 PSBK, Zm00001e042175 component PsbK of PS-II complex 0.05 OrthoFinder output from all 47 species
Zm00001e042230_P001 PSBK, Zm00001e042230 component PsbK of PS-II complex 0.05 OrthoFinder output from all 47 species
Zm00001e042357_P001 PSBK, Zm00001e042357 component PsbK of PS-II complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009539 photosystem II reaction center IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
MF GO:0020037 heme binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!