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  5. Ceric.01G098800.1

Ceric.01G098800.1 (RH8, ATRH8, Ceric.01G098800)


Aliases : RH8, ATRH8, Ceric.01G098800

Description : DDX6-type mRNA helicase *(RH12/RH8) & original description: pacid=50592042 polypeptide=Ceric.01G098800.1.p locus=Ceric.01G098800 ID=Ceric.01G098800.1.v2.1 annot-version=v2.1


Gene families : OG0001822 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001822_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G098800.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g075137 RH8, ATRH8 DDX6-type mRNA helicase *(RH12/RH8) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g04367 RH8, ATRH8 DDX6-type mRNA helicase *(RH12/RH8) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08850 RH8, ATRH8 DDX6-type mRNA helicase *(RH12/RH8) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12091 RH8, ATRH8 DDX6-type mRNA helicase *(RH12/RH8) & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os02g42860.1 RH8, ATRH8,... DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 94 257
IPR001650 Helicase_C 295 409
No external refs found!