Aliases : RAD51, ATRAD51, Ceric.01G082000
Description : component *(RAD51) of BRCC regulatory deubiquination complex & original description: pacid=50592534 polypeptide=Ceric.01G082000.1.p locus=Ceric.01G082000 ID=Ceric.01G082000.1.v2.1 annot-version=v2.1
Gene families : OG0001716 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001716_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ceric.01G082000.1 | |
Cluster | HCCA: Cluster_130 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ala_g23150 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.12 | OrthoFinder output from all 47 species | |
Als_g52823 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.07 | OrthoFinder output from all 47 species | |
Aspi01Gene38719.t1 | XRCC3, ATXRCC3,... | component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene65488.t1 | RAD51, ATRAD51,... | component *(RAD51) of BRCC regulatory deubiquination... | 0.09 | OrthoFinder output from all 47 species | |
Cre06.g278151 | XRCC3, ATXRCC3 | DNA repair protein XRCC3 homolog OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
Cre14.g622850 | RAD51, ATRAD51 | DNA damage response.BRCC DNA-damage response... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g00622 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.08 | OrthoFinder output from all 47 species | |
Dcu_g00814 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.09 | OrthoFinder output from all 47 species | |
GSVIVT01015002001 | RAD51, ATRAD51 | DNA damage response.BRCC DNA-damage response... | 0.07 | OrthoFinder output from all 47 species | |
Gb_14443 | RAD51, ATRAD51 | DNA repair protein RAD51 homolog OS=Solanum lycopersicum... | 0.08 | OrthoFinder output from all 47 species | |
Len_g09185 | XRCC3, ATXRCC3 | component *(XRCC3) of RAD51c-XRCC3 accessory DSB repair... | 0.06 | OrthoFinder output from all 47 species | |
Len_g11468 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.04 | OrthoFinder output from all 47 species | |
Len_g59568 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.09 | OrthoFinder output from all 47 species | |
Lfl_g17235 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.09 | OrthoFinder output from all 47 species | |
MA_93267g0010 | RAD51, ATRAD51 | DNA repair protein RAD51 homolog 1 OS=Arabidopsis... | 0.1 | OrthoFinder output from all 47 species | |
MA_93267g0020 | RAD51, ATRAD51 | DNA repair protein RAD51 homolog 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Mp3g22920.1 | RAD51, ATRAD51 | component RAD51 of BRCC DNA-damage response complex | 0.04 | OrthoFinder output from all 47 species | |
Mp7g15410.1 | XRCC3, ATXRCC3 | component XRCC3 of RAD51c-XRCC3 accessory DSB repair heterodimer | 0.15 | OrthoFinder output from all 47 species | |
Msp_g01981 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.11 | OrthoFinder output from all 47 species | |
Nbi_g04179 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.16 | OrthoFinder output from all 47 species | |
Ore_g29670 | RAD51, ATRAD51 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g32787 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.04 | OrthoFinder output from all 47 species | |
Ore_g45230 | RAD51, ATRAD51 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g02833 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.07 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000652 | ARLIM15, DMC1, ATDMC1 | not classified & original description: CDS=1-1248 | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g017540.4.1 | RAD51, ATRAD51,... | component RAD51 of BRCC DNA-damage response complex | 0.06 | OrthoFinder output from all 47 species | |
Spa_g12699 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g38367 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.09 | OrthoFinder output from all 47 species | |
Tin_g05894 | RAD51, ATRAD51 | component *(RAD51) of BRCC regulatory deubiquination... | 0.1 | OrthoFinder output from all 47 species | |
Zm00001e035339_P001 | RAD51, ATRAD51,... | component RAD51 of BRCC DNA-damage response complex | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | HCCA |
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
MF | GO:0005524 | ATP binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006260 | DNA replication | IEP | HCCA |
BP | GO:0006479 | protein methylation | IEP | HCCA |
BP | GO:0007017 | microtubule-based process | IEP | HCCA |
BP | GO:0007018 | microtubule-based movement | IEP | HCCA |
MF | GO:0008017 | microtubule binding | IEP | HCCA |
MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
BP | GO:0008213 | protein alkylation | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0016570 | histone modification | IEP | HCCA |
BP | GO:0016571 | histone methylation | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
BP | GO:0032259 | methylation | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013632 | DNA_recomb/repair_Rad51_C | 83 | 335 |
No external refs found! |