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  5. Ceric.01G050900.1

Ceric.01G050900.1 (TIC20, Ceric.01G050900)


Aliases : TIC20, Ceric.01G050900

Description : component *(Tic20-I/IV) of inner envelope TIC-20 complex & original description: pacid=50590476 polypeptide=Ceric.01G050900.1.p locus=Ceric.01G050900 ID=Ceric.01G050900.1.v2.1 annot-version=v2.1


Gene families : OG0005319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G050900.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT1G04940 TIC20 translocon at the inner envelope membrane of chloroplasts 20 0.07 OrthoFinder output from all 47 species
Adi_g050694 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.03 OrthoFinder output from all 47 species
Als_g04203 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.09 OrthoFinder output from all 47 species
Aspi01Gene07138.t1 TIC20, Aspi01Gene07138 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.03 OrthoFinder output from all 47 species
Dcu_g14209 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.04 OrthoFinder output from all 47 species
GSVIVT01009769001 TIC20 Protein translocation.chloroplast.inner envelope TIC... 0.06 OrthoFinder output from all 47 species
LOC_Os07g38110.1 LOC_Os07g38110 component Tic20-I/IV of inner envelope TIC-20 complex 0.03 OrthoFinder output from all 47 species
Mp3g05820.1 TIC20 component Tic20-I/IV of inner envelope TIC-20 complex 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g012041 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.03 OrthoFinder output from all 47 species
Solyc05g054720.3.1 TIC20, Solyc05g054720 component Tic20-I/IV of inner envelope TIC-20 complex 0.05 OrthoFinder output from all 47 species
Spa_g06282 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.04 OrthoFinder output from all 47 species
Spa_g29705 TIC20 component *(Tic20-I/IV) of inner envelope TIC-20 complex... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006353 DNA-templated transcription termination IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008531 riboflavin kinase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0017006 protein-tetrapyrrole linkage IEP HCCA
BP GO:0017007 protein-bilin linkage IEP HCCA
BP GO:0017009 protein-phycocyanobilin linkage IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0047429 nucleoside triphosphate diphosphatase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005691 Tic20 82 251
No external refs found!