Ceric.01G045700.1 (AtTLP3, TLP3, Ceric.01G045700)


Aliases : AtTLP3, TLP3, Ceric.01G045700

Description : TUB-type transcription factor & original description: pacid=50590653 polypeptide=Ceric.01G045700.1.p locus=Ceric.01G045700 ID=Ceric.01G045700.1.v2.1 annot-version=v2.1


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G045700.1

Target Alias Description ECC score Gene Family Method Actions
AT1G53320 AtTLP7, TLP7 tubby like protein 7 0.02 OrthoFinder output from all 47 species
Ala_g01968 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01736 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28748 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05949 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17487 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037815 AtTLP3, TLP3 TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g03958 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04838 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09092 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30776 AtTLP1, TLP1 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_28725 TLP10, AtTLP10 transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
LOC_Os08g01290.5 TLP10, AtTLP10,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
Msp_g12282 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04550 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55099 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
BP GO:0016073 snRNA metabolic process IEP HCCA
BP GO:0016180 snRNA processing IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034472 snRNA 3'-end processing IEP HCCA
BP GO:0034477 U6 snRNA 3'-end processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 129 420
IPR001810 F-box_dom 68 113
No external refs found!