1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.01G021200.1

Ceric.01G021200.1 (Ceric.01G021200)


Aliases : Ceric.01G021200

Description : SBP-type transcription factor & original description: pacid=50592374 polypeptide=Ceric.01G021200.1.p locus=Ceric.01G021200 ID=Ceric.01G021200.1.v2.1 annot-version=v2.1


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G021200.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00106940 SPL1R2, ATSPL14,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Aev_g01592 SPL1 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14742 SPL12 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10806 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013452001 SPL1R2, ATSPL14,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
Gb_00228 SPL1 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
LOC_Os01g18850.1 SPL1, LOC_Os01g18850 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Mp1g13640.1 No alias transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Pnu_g26886 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo437670 SPL1 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Solyc05g053240.4.1 SPL1, Solyc05g053240 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Spa_g26324 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006252_P001 SPL1, Zm00001e006252 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e025436_P002 SPL1, Zm00001e025436 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 183 256
No external refs found!