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  5. Ceric.01G019400.1

Ceric.01G019400.1 (Ceric.01G019400)


Aliases : Ceric.01G019400

Description : regulatory protein *(RGG) of mRNA quality control & original description: pacid=50592003 polypeptide=Ceric.01G019400.1.p locus=Ceric.01G019400 ID=Ceric.01G019400.1.v2.1 annot-version=v2.1


Gene families : OG0000880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.01G019400.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g060796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117739 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Aob_g01753 No alias regulatory protein *(RGG) of mRNA quality control &... 0.05 OrthoFinder output from all 47 species
Aob_g20955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13127 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Aop_g30074 No alias regulatory protein *(RGG) of mRNA quality control &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene06083.t1 Aspi01Gene06083 regulatory protein *(RGG) of mRNA quality control &... 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010039 No alias regulatory protein *(RGG) of mRNA quality control &... 0.07 OrthoFinder output from all 47 species
Azfi_s0208.g057973 No alias regulatory protein *(RGG) of mRNA quality control &... 0.04 OrthoFinder output from all 47 species
Cba_g17505 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000404.31 No alias No description available 0.04 OrthoFinder output from all 47 species
Dac_g08677 No alias regulatory protein *(RGG) of mRNA quality control &... 0.04 OrthoFinder output from all 47 species
Dac_g18766 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g15710 No alias regulatory protein *(RGG) of mRNA quality control &... 0.04 OrthoFinder output from all 47 species
Ehy_g25280 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g41880.1 LOC_Os01g41880 RGG repeats nuclear RNA binding protein A (Fragment)... 0.05 OrthoFinder output from all 47 species
LOC_Os01g52390.1 LOC_Os01g52390 RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 OrthoFinder output from all 47 species
LOC_Os05g45660.2 LOC_Os05g45660 RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 OrthoFinder output from all 47 species
LOC_Os05g51180.1 LOC_Os05g51180 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g51407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09581 No alias regulatory protein *(RGG) of mRNA quality control &... 0.04 OrthoFinder output from all 47 species
MA_141447g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_9567870g0010 No alias RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 OrthoFinder output from all 47 species
Mp4g04410.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g15170 No alias regulatory protein *(RGG) of mRNA quality control &... 0.02 OrthoFinder output from all 47 species
Nbi_g09170 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Pir_g04627 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g06151 No alias regulatory protein *(RGG) of mRNA quality control &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021917 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Sam_g19725 No alias regulatory protein *(RGG) of mRNA quality control &... 0.05 OrthoFinder output from all 47 species
Sam_g20153 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Sam_g26127 No alias regulatory protein *(RGG) of mRNA quality control &... 0.03 OrthoFinder output from all 47 species
Spa_g31252 No alias regulatory protein *(RGG) of mRNA quality control &... 0.04 OrthoFinder output from all 47 species
Spa_g50119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019955_P001 Zm00001e019955 RGG repeats nuclear RNA binding protein A (Fragment)... 0.04 OrthoFinder output from all 47 species
Zm00001e026661_P002 Zm00001e026661 RGG repeats nuclear RNA binding protein A (Fragment)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006861 HABP4_PAIRBP1-bd 168 271
IPR019084 Stm1-like_N 1 69
No external refs found!