Solyc06g066080.1.1 (Solyc06g066080.1)


Aliases : Solyc06g066080.1

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g066080.1.1
Cluster HCCA cluster: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Gene family
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.1 Gene family
AT1G20230 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.08 Gene family
AT1G56570 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 Gene family
AT1G69350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Gene family
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.15 Gene family
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.14 Gene family
AT3G01580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.08 Gene family
AT3G03580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Gene family
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.09 Gene family
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 Gene family
AT3G49142 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT4G14170 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.08 Gene family
AT4G15720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.07 Gene family
AT4G21065 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Gene family
AT4G35130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.13 Gene family
AT4G39530 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.09 Gene family
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT5G08490 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Gene family
AT5G27110 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Gene family
AT5G47460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 Gene family
AT5G52850 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.1 Gene family
AT5G56310 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
GSVIVT01000086001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
GSVIVT01000420001 No alias No description available 0.04 Gene family
GSVIVT01000968001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01007645001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
GSVIVT01008173001 No alias No description available 0.05 Gene family
GSVIVT01010654001 No alias No description available 0.09 Gene family
GSVIVT01011501001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01011735001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
GSVIVT01015087001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01015233001 No alias No description available 0.03 Gene family
GSVIVT01015325001 No alias No description available 0.07 Gene family
GSVIVT01017075001 No alias No description available 0.03 Gene family
GSVIVT01017378001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01017763001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
GSVIVT01018597001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
GSVIVT01020758001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01021023001 No alias No description available 0.06 Gene family
GSVIVT01021756001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01022230001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01023860001 No alias No description available 0.04 Gene family
GSVIVT01024493001 No alias No description available 0.05 Gene family
GSVIVT01024912001 No alias No description available 0.06 Gene family
GSVIVT01025569001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01025639001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01026025001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01026881001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
GSVIVT01027504001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01028022001 No alias No description available 0.03 Gene family
GSVIVT01028819001 No alias No description available 0.02 Gene family
GSVIVT01030054001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01031265001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
GSVIVT01031266001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01032394001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.1 Gene family
GSVIVT01032994001 No alias No description available 0.05 Gene family
GSVIVT01033004001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
GSVIVT01033304001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
GSVIVT01033837001 No alias No description available 0.07 Gene family
GSVIVT01035618001 No alias No description available 0.04 Gene family
GSVIVT01035837001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01036511001 No alias No description available 0.07 Gene family
GSVIVT01036788001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
GSVIVT01036943001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
GSVIVT01037332001 No alias No description available 0.04 Gene family
GSVIVT01037562001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os01g01115 Os01g0101150 No description available 0.05 Gene family
LOC_Os01g19380 Os01g0299150,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os02g44480 Os02g0663900 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
LOC_Os03g11700 Os03g0216400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os03g16450 Os03g0271300 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
LOC_Os03g60690 Os03g0821700 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os04g35650 Os04g0436800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os04g43430 Os04g0514500 No description available 0.05 Gene family
LOC_Os05g05490 Os05g0147600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
LOC_Os05g30710 Os05g0370000 No description available 0.02 Gene family
LOC_Os05g33920 Os05g0409800 No description available 0.03 Gene family
LOC_Os06g02200 Os06g0112000 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
LOC_Os07g05560 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.1 Gene family
LOC_Os08g38610 Os08g0494200,... No description available 0.07 Gene family
LOC_Os08g40020 Os08g0511000 No description available 0.07 Gene family
LOC_Os09g38310 Os09g0555400 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
LOC_Os11g45410 Os11g0679900,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
LOC_Os12g01850 Os12g0109300 No description available 0.05 Gene family
LOC_Os12g06650 Os12g0163600 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_105629g0010 No alias 35.1.27 not assigned.no ontology.tetratricopeptide... 0.03 Gene family
MA_106123g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_116829g0010 No alias No description available 0.03 Gene family
MA_136326g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_14938g0010 No alias No description available 0.03 Gene family
MA_175688g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_183278g0010 No alias No description available 0.03 Gene family
MA_185098g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_210823g0010 No alias No description available 0.03 Gene family
MA_22485g0010 No alias No description available 0.02 Gene family
MA_252238g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_33151g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_34492g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_39595g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_483636g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_52613g0020 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
MA_9360929g0010 No alias No description available 0.03 Gene family
Zm00001d003047 GRMZM2G077420 No description available 0.06 Gene family
Zm00001d003050 GRMZM2G331779 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
Zm00001d012961 GRMZM2G144071 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.11 Gene family
Zm00001d013941 GRMZM2G073017 No description available 0.08 Gene family
Zm00001d016473 GRMZM2G328961 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Zm00001d017518 GRMZM2G014977 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family
Zm00001d022224 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d023525 GRMZM2G001466 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d028422 GRMZM2G019689 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d028587 GRMZM5G836424 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.09 Gene family
Zm00001d029764 GRMZM2G383854 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Zm00001d030143 GRMZM2G430710 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Zm00001d033495 GRMZM5G849971 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Zm00001d036833 GRMZM5G811022 No description available 0.02 Gene family
Zm00001d037254 GRMZM2G060337 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d037891 No alias No description available 0.07 Gene family
Zm00001d038176 GRMZM2G141202 No description available 0.03 Gene family
Zm00001d039449 No alias No description available 0.07 Gene family
Zm00001d042039 GRMZM2G060536 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.08 Gene family
Zm00001d043068 GRMZM2G399433 No description available 0.06 Gene family
Zm00001d043081 GRMZM2G350410 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Zm00001d043107 GRMZM2G456114 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d044547 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.07 Gene family
Zm00001d049122 GRMZM2G333678 No description available 0.03 Gene family
Zm00001d050938 GRMZM2G163396 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d051576 GRMZM2G110483 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.06 Gene family
Zm00001d051816 GRMZM2G029859 No description available 0.1 Gene family
Zm00001d052794 GRMZM2G140600 No description available 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032867 DYW_dom 473 596
IPR002885 Pentatricopeptide_repeat 199 245
IPR002885 Pentatricopeptide_repeat 300 347
IPR002885 Pentatricopeptide_repeat 269 297
IPR002885 Pentatricopeptide_repeat 374 398
No external refs found!