Solyc06g065820.3.1 (Solyc06g065820.3)


Aliases : Solyc06g065820.3

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g065820.3.1
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G12980 ESR1, DRN Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.02 Gene family
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G13910 LEP Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.02 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
GSVIVT01018270001 No alias No description available 0.04 Gene family
GSVIVT01018271001 No alias No description available 0.04 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01028314001 No alias No description available 0.04 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os02g32040 Os02g0520000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.02 Gene family
LOC_Os04g46240 Os04g0547500 No description available 0.04 Gene family
LOC_Os04g46400 Os04g0549700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os04g55520 Os04g0648900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g08340 Os06g0181700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.04 Gene family
LOC_Os08g07700 Os08g0173700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os08g31580 Os08g0408500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.02 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10031781g0010 No alias No description available 0.03 Gene family
MA_15251g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_168025g0010 No alias No description available 0.02 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_314205g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_411387g0010 No alias No description available 0.01 Gene family
MA_9905g0010 No alias No description available 0.03 Gene family
Solyc03g005500.1.1 Solyc03g005500.1 No description available 0.03 Gene family
Solyc03g005520.1.1 Solyc03g005520.1 No description available 0.02 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.03 Gene family
Solyc06g068830.2.1 Solyc06g068830.2 No description available 0.04 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.04 Gene family
Solyc09g075420.3.1 Solyc09g075420.3 No description available 0.02 Gene family
Solyc11g045680.2.1 Solyc11g045680.2 No description available 0.04 Gene family
Solyc11g045690.2.1 Solyc11g045690.2 No description available 0.03 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.02 Gene family
Zm00001d008872 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d012584 GRMZM2G132223 No description available 0.03 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.03 Gene family
Zm00001d022488 GRMZM2G307119 No description available 0.03 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.04 Gene family
Zm00001d031498 GRMZM2G016079 No description available 0.02 Gene family
Zm00001d031501 GRMZM2G033656 No description available 0.02 Gene family
Zm00001d031861 GRMZM2G028386 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.03 Gene family
Zm00001d044950 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Zm00001d047860 GRMZM2G007406 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d049889 GRMZM2G156737 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.02 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 56
No external refs found!