Solyc06g065670.3.1 (Solyc06g065670.3)


Aliases : Solyc06g065670.3

Description : 34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 4 (PDR4)


Gene families : OG_01_0000021 (Gene family) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g065670.3.1
Cluster HCCA cluster: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.09 Gene family
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.04 Gene family
Cre01.g007000 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Cre17.g728400 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01015456001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01016999001 No alias No description available 0.02 Gene family
GSVIVT01017202001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01017337001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01034746001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g08260 Os01g0177900 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g42350 Os01g0609000 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os02g21340 Os02g0318450,... 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os08g43120 Os08g0544400 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
LOC_Os09g16330 Os09g0332700 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10426781g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.06 Gene family
MA_124091g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_135152g0010 No alias No description available 0.02 Gene family
MA_18770g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo133564 PACid_15409124 No description available 0.02 Gene family
Smo235359 PACid_15405313 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo441720 PACid_15410156 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc12g100180.2.1 Solyc12g100180.2 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d034940 GRMZM2G391815 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
Zm00001d039631 GRMZM2G118243 34.16 transport.ABC transporters and multidrug... 0.12 Gene family
Zm00001d052726 GRMZM2G451792 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
MF GO:0016887 ATPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013525 ABC_2_trans 511 722
IPR013525 ABC_2_trans 1143 1244
IPR029481 ABC_trans_N 68 117
IPR003439 ABC_transporter-like 846 997
IPR003439 ABC_transporter-like 142 357
No external refs found!