Solyc06g054260.1.1 (Solyc06g054260.1)


Aliases : Solyc06g054260.1

Description : 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide subunits Encodes a protein predicted by sequence similarity with spinach PsaD to be photosystem I reaction center subunit II (PsaD2) photosystem I subunit D-2 (PSAD-2)


Gene families : OG_01_0006545 (Gene family) Phylogenetic Tree(s): OG0006545_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g054260.1.1
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT1G03130 PSAD-2 photosystem I subunit D-2 0.33 Gene family
AT4G02770 PSAD-1 photosystem I subunit D-1 0.35 Gene family
Cre05.g238332 No alias 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide... 0.25 Gene family
GSVIVT01001159001 No alias 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide... 0.05 Gene family
MA_9169733g0010 No alias 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide... 0.11 Gene family
Zm00001d013039 GRMZM2G024150 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide... 0.32 Gene family
Zm00001d034543 GRMZM2G013342 1.1.2.2 PS.lightreaction.photosystem I.PSI polypeptide... 0.34 Gene family

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan
CC GO:0009538 photosystem I reaction center IEA InterProScan
BP GO:0015979 photosynthesis IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003685 PsaD 76 206
No external refs found!