Solyc06g053330.3.1 (Solyc06g053330.3)


Aliases : Solyc06g053330.3

Description : 27.3.50 RNA.regulation of transcription.General Transcription DNA bindingDNA-directed RNA polymerases


Gene families : OG_01_0008462 (Gene family) Phylogenetic Tree(s): OG0008462_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g053330.3.1
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT3G13940 No alias DNA binding;DNA-directed RNA polymerases 0.13 Gene family
Cre01.g070567 No alias No description available 0.02 Gene family
GSVIVT01016817001 No alias 27.3.50 RNA.regulation of transcription.General... 0.04 Gene family
LOC_Os11g40090 Os11g0615100 27.3.50 RNA.regulation of transcription.General... 0.08 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006351 transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009668 RNA_pol-assoc_fac_A49-like 53 409
No external refs found!