Solyc06g051920.3.1 (Solyc06g051920.3)


Aliases : Solyc06g051920.3

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 1 (CNGC1)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g051920.3.1
Cluster HCCA cluster: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.02 Gene family
AT5G57940 CNGC5, ATCNGC5 cyclic nucleotide gated channel 5 0.02 Gene family
GSVIVT01015970001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
GSVIVT01028711001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
LOC_Os04g55080 Os04g0643600 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
LOC_Os06g08850 Os06g0188000 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os06g10580 Os06g0207700 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
LOC_Os09g38580 Os09g0558300 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc02g086990.3.1 Solyc02g086990.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc03g007260.3.1 Solyc03g007260.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d002099 GRMZM2G023037 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d007925 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d021388 GRMZM2G135651 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d034076 GRMZM2G074317 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d038618 GRMZM2G078781 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
Zm00001d045075 GRMZM2G436583 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 89 398
IPR000595 cNMP-bd_dom 506 596
No external refs found!