Solyc06g050520.2.1 (Solyc06g050520.2)


Aliases : Solyc06g050520.2

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family Encodes a transcription factor that specifically binds to DRE/CRT cis elements (responsive to drought and low-temperature stress). Belongs to the DREB subfamily A-2 of ERF/AP2 transcription factor family (DREB2A). There are eight members in this subfamily including DREB2B. The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g050520.2.1
Cluster HCCA cluster: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G35700 ERF38, ATERF38 ERF family protein 38 0.02 Gene family
AT2G38340 DREB19 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G11140 CRF1 cytokinin response factor 1 0.04 Gene family
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.02 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G25390 SHN2 Integrase-type DNA-binding superfamily protein 0.04 Gene family
GSVIVT01021098001 No alias No description available 0.03 Gene family
GSVIVT01028050001 No alias No description available 0.08 Gene family
LOC_Os01g21120 Os01g0313300 No description available 0.02 Gene family
LOC_Os02g34260 Os02g0546600 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os02g43790 Os02g0654700 No description available 0.03 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.03 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os05g28350 Os05g0351200 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os05g29810 Os05g0361700 No description available 0.02 Gene family
LOC_Os05g39590 Os05g0473300 No description available 0.02 Gene family
LOC_Os05g41760 Os05g0497200 No description available 0.02 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os06g09390 Os06g0194000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os07g42510 Os07g0617000 No description available 0.02 Gene family
LOC_Os07g47330 Os07g0669500 No description available 0.02 Gene family
LOC_Os09g13940 Os09g0309700 No description available 0.02 Gene family
LOC_Os10g41330 Os10g0562900 No description available 0.02 Gene family
MA_16778g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
MA_168025g0010 No alias No description available 0.02 Gene family
MA_19420g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_84578g0010 No alias No description available 0.04 Gene family
Smo38500 PACid_15415796 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Smo428344 PACid_15413251 No description available 0.02 Gene family
Solyc08g078170.1.1 Solyc08g078170.1 No description available 0.03 Gene family
Solyc12g013660.2.1 Solyc12g013660.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d000339 GRMZM2G174347 No description available 0.03 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d002364 GRMZM2G068967 No description available 0.04 Gene family
Zm00001d002744 GRMZM2G172936 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d002761 GRMZM5G805505 No description available 0.02 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d009103 GRMZM2G053503 No description available 0.04 Gene family
Zm00001d010048 GRMZM2G006745 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d012584 GRMZM2G132223 No description available 0.03 Gene family
Zm00001d022488 GRMZM2G307119 No description available 0.02 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.03 Gene family
Zm00001d026271 GRMZM2G438202 No description available 0.04 Gene family
Zm00001d027924 GRMZM2G129674 No description available 0.05 Gene family
Zm00001d030513 GRMZM2G039870 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d038320 GRMZM2G100727 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d040651 GRMZM2G169382 No description available 0.03 Gene family
Zm00001d042588 GRMZM2G105266 No description available 0.02 Gene family
Zm00001d043205 GRMZM2G310368 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d045204 GRMZM2G301860 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d047860 GRMZM2G007406 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d049364 GRMZM2G089995 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 80 130
No external refs found!