Solyc06g049030.3.1 (Solyc06g049030.3)


Aliases : Solyc06g049030.3

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g049030.3.1
Cluster HCCA cluster: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT1G22500 No alias RING/U-box superfamily protein 0.05 Gene family
AT1G49220 No alias RING/U-box superfamily protein 0.06 Gene family
AT3G03550 No alias RING/U-box superfamily protein 0.03 Gene family
Cpa|evm.model.tig00020629.137 No alias No description available 0.02 Gene family
GSVIVT01016564001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os01g53500 Os01g0736600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_25345g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc09g010650.1.1 Solyc09g010650.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d014949 GRMZM2G053707 No description available 0.03 Gene family
Zm00001d016682 GRMZM5G860214 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d017923 No alias No description available 0.03 Gene family
Zm00001d018122 GRMZM2G323013 No description available 0.08 Gene family
Zm00001d026021 GRMZM2G031280 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL8 0.09 Gene family
Zm00001d043050 GRMZM2G426613 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d045077 GRMZM2G151913 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d052268 GRMZM2G080079 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 108 151
No external refs found!