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  5. AMTR_s00133p00054340

AMTR_s00133p00054340 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00133.19

Description : PsbP domain-containing protein 3, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0007755 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007755_tree ,
OG_02_0009366 (LandPlants) Phylogenetic Tree(s): OG_02_0009366_tree ,
OG_03_0010746 (SeedPlants) Phylogenetic Tree(s): OG_03_0010746_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00133p00054340
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.09 Archaeplastida
Cpa|evm.model.tig00021682.6 No alias No description available 0.02 Archaeplastida
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.11 Archaeplastida
Pp3c4_15070V3.1 No alias Photosystem II reaction center PsbP family protein 0.03 Archaeplastida
Smo448162 No alias PsbP domain-containing protein 3, chloroplastic... 0.03 Archaeplastida
Solyc12g094720.3.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e003568_P001 No alias PsbP domain-containing protein 3, chloroplastic... 0.03 Archaeplastida
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.09 LandPlants
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.11 LandPlants
Pp3c4_15070V3.1 No alias Photosystem II reaction center PsbP family protein 0.03 LandPlants
Smo448162 No alias PsbP domain-containing protein 3, chloroplastic... 0.02 LandPlants
Solyc12g094720.3.1 No alias no hits & (original description: none) 0.07 LandPlants
Zm00001e003568_P001 No alias PsbP domain-containing protein 3, chloroplastic... 0.02 LandPlants
AT1G76450 No alias Photosystem II reaction center PsbP family protein 0.1 SeedPlants
GSVIVT01013427001 No alias PsbP domain-containing protein 3, chloroplastic... 0.11 SeedPlants
Solyc12g094720.3.1 No alias no hits & (original description: none) 0.07 SeedPlants
Zm00001e003568_P001 No alias PsbP domain-containing protein 3, chloroplastic... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002683 PsbP_C 101 249
No external refs found!