Solyc06g035970.3.1 (Solyc06g035970.3)


Aliases : Solyc06g035970.3

Description : 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli beta-tubulin, preferentially expressed in endodermal and phloem cells of primary roots and in the vascular tissues of leaves, stems, and flowers. tubulin beta 8 (TUB8)


Gene families : OG_01_0000204 (Gene family) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g035970.3.1
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT1G20010 TUB5 tubulin beta-5 chain 0.05 Gene family
AT5G12250 TUB6 beta-6 tubulin 0.03 Gene family
AT5G44340 TUB4 tubulin beta chain 4 0.04 Gene family
AT5G62700 TUB3 tubulin beta chain 3 0.03 Gene family
Cpa|evm.model.tig00001067.14 No alias 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.02 Gene family
Cpa|evm.model.tig00001067.6 No alias 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.03 Gene family
GSVIVT01019758001 No alias 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.02 Gene family
LOC_Os01g18050 Os01g0282800 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.02 Gene family
LOC_Os01g59150 Os01g0805900 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.03 Gene family
LOC_Os02g07060 Os02g0167300 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.03 Gene family
LOC_Os06g46000 Os06g0671900 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.06 Gene family
MA_230579g0020 No alias 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.03 Gene family
MA_65436g0010 No alias 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.02 Gene family
Smo164404 PACid_15410474 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.02 Gene family
Smo170592 PACid_15406835 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.02 Gene family
Smo23429 PACid_15415611 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.02 Gene family
Smo79202 PACid_15422771 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.02 Gene family
Zm00001d008216 No alias 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.03 Gene family
Zm00001d012556 GRMZM2G172932 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.04 Gene family
Zm00001d036626 GRMZM2G043822 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli beta... 0.03 Gene family
Zm00001d043158 GRMZM2G071790 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli... 0.04 Gene family
Zm00001d046996 No alias 31.1.1.2 cell.organisation.cytoskeleton.mikrotubuli beta... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!