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  5. Pp3c9_6760V3.1

Pp3c9_6760V3.1


Description : SNARE-like superfamily protein


Gene families : OG_01_0000560 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000560_tree ,
OG_02_0005986 (LandPlants) Phylogenetic Tree(s): OG_02_0005986_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c9_6760V3.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00025420 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
AT3G50860 No alias Clathrin adaptor complex small chain family protein 0.02 Archaeplastida
AT4G35410 No alias Clathrin adaptor complex small chain family protein 0.03 Archaeplastida
Cpa|evm.model.tig00001003.32 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
Cpa|evm.model.tig00020780.8 No alias AP-2 complex subunit sigma OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre07.g324600 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 Archaeplastida
Cre07.g330950 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 Archaeplastida
Cre09.g394100 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
GSVIVT01009900001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
GSVIVT01028912001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
Gb_30890 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.02 Archaeplastida
Gb_36359 No alias AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g25110.1 No alias AP-3 complex subunit sigma OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g57040.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 Archaeplastida
LOC_Os08g30480.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.03 Archaeplastida
LOC_Os10g22330.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 Archaeplastida
LOC_Os12g10560.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.05 Archaeplastida
MA_130401g0010 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.07 Archaeplastida
MA_23830g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9040447g0010 No alias AP-4 complex subunit sigma OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g19570.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.07 Archaeplastida
Mp1g27490.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.07 Archaeplastida
Mp6g09610.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 Archaeplastida
Pp3c15_9140V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida
Solyc02g085240.4.1 No alias small subunit sigma of AP-3 Golgi to vacuole cargo... 0.01 Archaeplastida
Solyc04g081410.3.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.02 Archaeplastida
Solyc05g026130.3.1 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.02 Archaeplastida
Solyc11g005220.2.1 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.05 Archaeplastida
Zm00001e005895_P003 No alias small subunit sigma of AP-1 trans-Golgi network cargo... 0.04 Archaeplastida
Zm00001e011050_P001 No alias small subunit sigma of AP-2 cargo adaptor complex 0.03 Archaeplastida
Zm00001e018362_P003 No alias small subunit sigma of AP-2 cargo adaptor complex 0.05 Archaeplastida
Zm00001e022339_P001 No alias small subunit sigma of AP-4 vacuole cargo adaptor complex 0.04 Archaeplastida
GSVIVT01009900001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 LandPlants
LOC_Os12g10560.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.05 LandPlants
Mp1g19570.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.07 LandPlants
Solyc04g081410.3.1 No alias small subunit sigma of AP-2 cargo adaptor complex 0.02 LandPlants
Zm00001e011050_P001 No alias small subunit sigma of AP-2 cargo adaptor complex 0.03 LandPlants
Zm00001e018362_P003 No alias small subunit sigma of AP-2 cargo adaptor complex 0.05 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 1 140
No external refs found!