AMTR_s00131p00119200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00131.93

Description : RNA biosynthesis.transcriptional activation.TIFY transcription factor


Gene families : OG_01_0000437 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000437_tree ,
OG_02_0000221 (LandPlants) Phylogenetic Tree(s): OG_02_0000221_tree ,
OG_03_0000753 (SeedPlants) Phylogenetic Tree(s): OG_03_0000753_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00131p00119200
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G17380 TIFY11A, JAZ5 jasmonate-zim-domain protein 5 0.08 Archaeplastida
AT1G19180 TIFY10A, JAZ1 jasmonate-zim-domain protein 1 0.04 Archaeplastida
AT1G74950 TIFY10B, JAZ2 TIFY domain/Divergent CCT motif family protein 0.04 Archaeplastida
GSVIVT01015042001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.11 Archaeplastida
GSVIVT01016721001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.04 Archaeplastida
GSVIVT01023256001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.02 Archaeplastida
Gb_19069 No alias transcription factor (TIFY) 0.04 Archaeplastida
LOC_Os03g08320.1 No alias transcription factor (TIFY) 0.04 Archaeplastida
LOC_Os03g08330.1 No alias transcription factor (TIFY) 0.07 Archaeplastida
LOC_Os03g27900.1 No alias transcription factor (TIFY) 0.02 Archaeplastida
LOC_Os03g28940.1 No alias component JAZ of jasmonic acid receptor complex.... 0.03 Archaeplastida
LOC_Os07g42370.1 No alias component JAZ of jasmonic acid receptor complex.... 0.06 Archaeplastida
LOC_Os10g25290.1 No alias transcription factor (TIFY) 0.06 Archaeplastida
MA_10229741g0010 No alias transcription factor (TIFY) 0.04 Archaeplastida
MA_10426545g0010 No alias transcription factor (TIFY) 0.03 Archaeplastida
MA_10426545g0020 No alias transcription factor (TIFY) 0.03 Archaeplastida
MA_10436815g0010 No alias transcription factor (TIFY) 0.03 Archaeplastida
MA_131708g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_1854g0020 No alias transcription factor (TIFY) 0.04 Archaeplastida
MA_68496g0010 No alias transcription factor (TIFY) 0.02 Archaeplastida
MA_8355655g0010 No alias transcription factor (TIFY) 0.02 Archaeplastida
Mp6g06230.1 No alias transcription factor (TIFY) 0.02 Archaeplastida
Pp3c16_13490V3.1 No alias TIFY domain/Divergent CCT motif family protein 0.04 Archaeplastida
Pp3c25_6300V3.1 No alias jasmonate-zim-domain protein 4 0.03 Archaeplastida
Pp3c25_6330V3.1 No alias jasmonate-zim-domain protein 3 0.03 Archaeplastida
Pp3c5_11730V3.1 No alias TIFY domain/Divergent CCT motif family protein 0.03 Archaeplastida
Solyc03g122190.3.1 No alias transcription factor (TIFY) 0.04 Archaeplastida
Solyc06g068930.2.1 No alias transcription factor (TIFY) 0.02 Archaeplastida
Zm00001e000589_P001 No alias transcription factor (TIFY) 0.05 Archaeplastida
Zm00001e000590_P001 No alias transcription factor (TIFY) 0.06 Archaeplastida
Zm00001e001934_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.04 Archaeplastida
Zm00001e004861_P001 No alias transcription factor (TIFY) 0.08 Archaeplastida
Zm00001e004862_P001 No alias transcription factor (TIFY) 0.07 Archaeplastida
Zm00001e009884_P001 No alias Protein TIFY 10c OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e012855_P001 No alias transcription factor (TIFY) 0.02 Archaeplastida
Zm00001e012856_P001 No alias transcription factor (TIFY) 0.09 Archaeplastida
Zm00001e035549_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.05 Archaeplastida
AT1G17380 TIFY11A, JAZ5 jasmonate-zim-domain protein 5 0.06 LandPlants
AT1G19180 TIFY10A, JAZ1 jasmonate-zim-domain protein 1 0.04 LandPlants
AT1G74950 TIFY10B, JAZ2 TIFY domain/Divergent CCT motif family protein 0.03 LandPlants
GSVIVT01015042001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.09 LandPlants
GSVIVT01016721001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.05 LandPlants
GSVIVT01023256001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.02 LandPlants
Gb_19069 No alias transcription factor (TIFY) 0.03 LandPlants
LOC_Os03g08320.1 No alias transcription factor (TIFY) 0.04 LandPlants
LOC_Os03g08330.1 No alias transcription factor (TIFY) 0.07 LandPlants
LOC_Os03g28940.1 No alias component JAZ of jasmonic acid receptor complex.... 0.03 LandPlants
LOC_Os07g42370.1 No alias component JAZ of jasmonic acid receptor complex.... 0.04 LandPlants
LOC_Os09g26780.1 No alias transcription factor (TIFY) 0.02 LandPlants
LOC_Os10g25290.1 No alias transcription factor (TIFY) 0.07 LandPlants
MA_10229741g0010 No alias transcription factor (TIFY) 0.04 LandPlants
MA_10426545g0010 No alias transcription factor (TIFY) 0.02 LandPlants
MA_10426545g0020 No alias transcription factor (TIFY) 0.03 LandPlants
MA_10430801g0010 No alias no hits & (original description: none) 0.01 LandPlants
MA_10436815g0010 No alias transcription factor (TIFY) 0.03 LandPlants
MA_1854g0020 No alias transcription factor (TIFY) 0.03 LandPlants
MA_68496g0010 No alias transcription factor (TIFY) 0.02 LandPlants
MA_8757791g0010 No alias transcription factor (TIFY) 0.02 LandPlants
Pp3c16_13490V3.1 No alias TIFY domain/Divergent CCT motif family protein 0.03 LandPlants
Pp3c25_6300V3.1 No alias jasmonate-zim-domain protein 4 0.03 LandPlants
Pp3c25_6330V3.1 No alias jasmonate-zim-domain protein 3 0.03 LandPlants
Pp3c5_11730V3.1 No alias TIFY domain/Divergent CCT motif family protein 0.02 LandPlants
Solyc03g122190.3.1 No alias transcription factor (TIFY) 0.03 LandPlants
Solyc06g068930.2.1 No alias transcription factor (TIFY) 0.02 LandPlants
Zm00001e000589_P001 No alias transcription factor (TIFY) 0.05 LandPlants
Zm00001e000590_P001 No alias transcription factor (TIFY) 0.06 LandPlants
Zm00001e001934_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.03 LandPlants
Zm00001e004861_P001 No alias transcription factor (TIFY) 0.07 LandPlants
Zm00001e004862_P001 No alias transcription factor (TIFY) 0.07 LandPlants
Zm00001e012855_P001 No alias transcription factor (TIFY) 0.02 LandPlants
Zm00001e012856_P001 No alias transcription factor (TIFY) 0.08 LandPlants
Zm00001e035549_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.04 LandPlants
AT1G19180 TIFY10A, JAZ1 jasmonate-zim-domain protein 1 0.03 SeedPlants
GSVIVT01015042001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.08 SeedPlants
GSVIVT01016721001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.04 SeedPlants
LOC_Os03g08320.1 No alias transcription factor (TIFY) 0.04 SeedPlants
LOC_Os03g08330.1 No alias transcription factor (TIFY) 0.05 SeedPlants
LOC_Os03g28940.1 No alias component JAZ of jasmonic acid receptor complex.... 0.03 SeedPlants
LOC_Os07g42370.1 No alias component JAZ of jasmonic acid receptor complex.... 0.03 SeedPlants
LOC_Os10g25290.1 No alias transcription factor (TIFY) 0.05 SeedPlants
Solyc03g122190.3.1 No alias transcription factor (TIFY) 0.02 SeedPlants
Zm00001e000589_P001 No alias transcription factor (TIFY) 0.02 SeedPlants
Zm00001e000590_P001 No alias transcription factor (TIFY) 0.06 SeedPlants
Zm00001e001934_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.03 SeedPlants
Zm00001e004861_P001 No alias transcription factor (TIFY) 0.05 SeedPlants
Zm00001e004862_P001 No alias transcription factor (TIFY) 0.06 SeedPlants
Zm00001e006083_P001 No alias no hits & (original description: none) 0.01 SeedPlants
Zm00001e012855_P001 No alias transcription factor (TIFY) 0.02 SeedPlants
Zm00001e012856_P001 No alias transcription factor (TIFY) 0.07 SeedPlants
Zm00001e035549_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010399 Tify_dom 109 142
IPR018467 CCT_CS 177 201
No external refs found!