Solyc06g009280.2.1 (Solyc06g009280.2)


Aliases : Solyc06g009280.2

Description : 34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 21 (PGP21)


Gene families : OG_01_0000036 (Gene family) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g009280.2.1
Cluster HCCA cluster: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AT1G02520 PGP11 P-glycoprotein 11 0.05 Gene family
AT1G28010 ABCB14, ATABCB14, PGP14 P-glycoprotein 14 0.02 Gene family
AT3G28415 No alias ABC transporter family protein 0.02 Gene family
AT3G62150 PGP21 P-glycoprotein 21 0.03 Gene family
AT4G01830 PGP5 P-glycoprotein 5 0.04 Gene family
AT4G18050 PGP9 P-glycoprotein 9 0.04 Gene family
GSVIVT01000580001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01028256001 No alias 34.16 transport.ABC transporters and multidrug... 0.05 Gene family
GSVIVT01032578001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g18670 Os01g0290700 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g50080 Os01g0695700 No description available 0.02 Gene family
LOC_Os01g50100 Os01g0695800 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os02g46680 Os02g0693700 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os03g08380 Os03g0181675,... No description available 0.02 Gene family
LOC_Os03g17180 Os03g0280000 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10432922g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_111099g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_138894g0010 No alias No description available 0.02 Gene family
MA_18863g0010 No alias No description available 0.03 Gene family
MA_3437g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_9253g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_9415070g0020 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc02g087410.3.1 Solyc02g087410.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc03g005860.3.1 Solyc03g005860.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc08g076720.3.1 Solyc08g076720.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc12g098840.2.1 Solyc12g098840.2 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Zm00001d025703 GRMZM2G111462 34.16 transport.ABC transporters and multidrug... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
MF GO:0016887 ATPase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1062 1212
IPR003439 ABC_transporter-like 2326 2476
IPR011527 ABC1_TM_dom 722 994
IPR011527 ABC1_TM_dom 1323 1596
IPR011527 ABC1_TM_dom 1986 2255
IPR011527 ABC1_TM_dom 59 332
IPR003439 ABC_transporter-like 1667 1813
IPR003439 ABC_transporter-like 403 549
No external refs found!