Solyc06g007230.1.1 (Solyc06g007230.1)


Aliases : Solyc06g007230.1

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING TOXICOS EN LEVADURA 63 (ATL63)


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g007230.1.1
Cluster HCCA cluster: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
AT1G23980 No alias RING/U-box superfamily protein 0.05 Gene family
AT2G42360 No alias RING/U-box superfamily protein 0.03 Gene family
AT3G10910 No alias RING/U-box superfamily protein 0.03 Gene family
AT4G09100 No alias RING/U-box superfamily protein 0.02 Gene family
GSVIVT01008756001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
GSVIVT01028038001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
GSVIVT01028306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os01g53500 Os01g0736600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os05g39260 Os05g0468900 No description available 0.03 Gene family
LOC_Os06g11450 Os06g0218300 No description available 0.02 Gene family
LOC_Os10g39770 Os10g0544600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_114175g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_38690g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
MA_8693914g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
Zm00001d016104 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d016682 GRMZM5G860214 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d027684 GRMZM2G056786 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d030945 GRMZM2G124423 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 118 161
No external refs found!