Solyc06g005670.3.1 (Solyc06g005670.3)


Aliases : Solyc06g005670.3

Description : No description available


Gene families : OG_01_0000579 (Gene family) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc06g005670.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT2G29190 APUM2, PUM2 pumilio 2 0.05 Gene family
Cpa|evm.model.tig00001065.14 No alias No description available 0.01 Gene family
GSVIVT01016236001 No alias No description available 0.03 Gene family
GSVIVT01016507001 No alias No description available 0.05 Gene family
GSVIVT01024919001 No alias No description available 0.03 Gene family
MA_12280g0010 No alias No description available 0.01 Gene family
MA_23070g0010 No alias No description available 0.02 Gene family
Smo1983 PACid_15411026 No description available 0.03 Gene family
Smo86145 PACid_15420610 No description available 0.02 Gene family
Zm00001d035679 GRMZM2G012964 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 638 670
IPR001313 Pumilio_RNA-bd_rpt 819 851
IPR001313 Pumilio_RNA-bd_rpt 710 739
IPR001313 Pumilio_RNA-bd_rpt 748 772
IPR001313 Pumilio_RNA-bd_rpt 855 887
IPR001313 Pumilio_RNA-bd_rpt 904 930
IPR001313 Pumilio_RNA-bd_rpt 782 812
IPR001313 Pumilio_RNA-bd_rpt 674 703
IPR012940 NABP 285 344
IPR012940 NABP 343 636
No external refs found!