Solyc05g055940.3.1 (Solyc05g055940.3)


Aliases : Solyc05g055940.3

Description : 27.3.25 RNA.regulation of transcription.MYB domain transcription factor family Homeodomain-like superfamily protein


Gene families : OG_01_0000018 (Gene family) Phylogenetic Tree(s): OG0000018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g055940.3.1
Cluster HCCA cluster: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.05 Gene family
AT2G40260 No alias Homeodomain-like superfamily protein 0.02 Gene family
AT3G04030 No alias Homeodomain-like superfamily protein 0.05 Gene family
AT3G12730 No alias Homeodomain-like superfamily protein 0.03 Gene family
GSVIVT01001376001 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
GSVIVT01015900001 No alias No description available 0.02 Gene family
GSVIVT01036717001 No alias No description available 0.02 Gene family
LOC_Os08g33050 Os08g0426866 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_15920g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
MA_93883g0010 No alias 27.3.20 RNA.regulation of transcription.G2-like... 0.03 Gene family
Smo417629 PACid_15405256 27.3.20 RNA.regulation of transcription.G2-like... 0.02 Gene family
Smo441930 PACid_15411722 No description available 0.03 Gene family
Solyc10g078720.2.1 Solyc10g078720.2 27.3.20 RNA.regulation of transcription.G2-like... 0.05 Gene family
Solyc10g080460.2.1 Solyc10g080460.2 27.3.20 RNA.regulation of transcription.G2-like... 0.04 Gene family
Zm00001d015407 GRMZM2G052544 No description available 0.02 Gene family
Zm00001d020020 GRMZM2G173943 No description available 0.02 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 338 383
IPR001005 SANT/Myb 255 306
No external refs found!