Solyc05g055750.3.1 (Solyc05g055750.3)


Aliases : Solyc05g055750.3

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group I WRKY DNA-binding protein 34 (WRKY34)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g055750.3.1
Cluster HCCA cluster: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AT2G23320 WRKY15 WRKY DNA-binding protein 15 0.02 Gene family
AT2G47260 WRKY23, ATWRKY23 WRKY DNA-binding protein 23 0.02 Gene family
AT4G26440 MSP3, ATWRKY34, WRKY34 WRKY DNA-binding protein 34 0.04 Gene family
AT5G49520 WRKY48, ATWRKY48 WRKY DNA-binding protein 48 0.02 Gene family
GSVIVT01021397001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01037686001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g09080 Os01g0185900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os01g09100 Os01g0186000 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
LOC_Os01g53260 Os01g0734000 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os03g20550 Os03g0321700 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os04g50920 Os04g0597300 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
LOC_Os11g02540 Os11g0117550,... No description available 0.02 Gene family
LOC_Os12g02470 Os12g0116750,... No description available 0.02 Gene family
MA_10432914g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
MA_10434976g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
MA_136551g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
MA_892467g0010 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.01 Gene family
Zm00001d009595 GRMZM2G448605 No description available 0.02 Gene family
Zm00001d012746 GRMZM2G013391 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d026218 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Zm00001d038451 GRMZM2G169966 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d039044 GRMZM2G366795 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 70 126
IPR003657 WRKY_dom 254 311
No external refs found!