Solyc05g055710.3.1 (Solyc05g055710.3)


Aliases : Solyc05g055710.3

Description : 26.7 misc.oxidases - copper, flavone etc SKU5 similar 12 (sks12)


Gene families : OG_01_0000406 (Gene family) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g055710.3.1
Cluster HCCA cluster: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G55560 sks14 SKU5 similar 14 0.07 Gene family
AT1G55570 sks12 SKU5 similar 12 0.03 Gene family
AT1G76160 sks5 SKU5 similar 5 0.03 Gene family
AT3G13390 sks11 SKU5 similar 11 0.06 Gene family
AT3G13400 sks13 SKU5 similar 13 0.07 Gene family
LOC_Os01g60080 Os01g0816700 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.03 Gene family
LOC_Os05g40740 Os05g0485800 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.05 Gene family
Solyc01g005510.3.1 Solyc01g005510.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.04 Gene family
Solyc01g056310.3.1 Solyc01g056310.3 26.7 misc.oxidases - copper, flavone etc SKU5 similar 12 (sks12) 0.05 Gene family
Zm00001d012524 GRMZM2G068682 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.05 Gene family
Zm00001d038521 GRMZM2G129064 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.07 Gene family
Zm00001d043090 GRMZM2G157929 26.7 misc.oxidases - copper, flavone etc SKU5 similar 11 (sks11) 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan
MF GO:0016491 oxidoreductase activity IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011707 Cu-oxidase_3 32 145
IPR001117 Cu-oxidase 158 298
IPR011706 Cu-oxidase_2 402 514
No external refs found!