Solyc05g055500.1.1 (Solyc05g055500.1)


Aliases : Solyc05g055500.1

Description : 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family C2H2-type zinc finger family protein


Gene families : OG_01_0000035 (Gene family) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc05g055500.1.1
Cluster HCCA cluster: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G27730 ZAT10, STZ salt tolerance zinc finger 0.02 Gene family
AT3G10470 No alias C2H2-type zinc finger family protein 0.07 Gene family
AT4G35610 No alias zinc finger (C2H2 type) family protein 0.03 Gene family
AT4G35700 No alias zinc finger (C2H2 type) family protein 0.02 Gene family
AT5G04340 CZF2, ZAT6, C2H2 zinc finger of Arabidopsis thaliana 6 0.03 Gene family
GSVIVT01023887001 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.09 Gene family
LOC_Os02g44120 Os02g0659100 No description available 0.02 Gene family
LOC_Os03g55540 Os03g0764100 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
LOC_Os04g46670 Os04g0552400 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
MA_602g0010 No alias 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.01 Gene family
Solyc01g090840.3.1 Solyc01g090840.3 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.03 Gene family
Solyc06g075780.2.1 Solyc06g075780.2 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Solyc12g088390.2.1 Solyc12g088390.2 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d002732 GRMZM2G132756 No description available 0.02 Gene family
Zm00001d026166 GRMZM2G402027 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.02 Gene family
Zm00001d036330 GRMZM2G307402 27.3.11 RNA.regulation of transcription.C2H2 zinc finger... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!